Stem-loop pab-MIR11485

Accession

MI0036941

Description

Picea abies pab-MIR11485 precursor miRNA

Sequence

aguaagaaggcagcugcUAGAAUGCAAAAAGUCUGCUAcuccgacuucuucuucgucagcauauuccuccuguugcuguaacaggccuuuugcauuccuagcugcugccuucuaugcu
((((((((((((((.((((((((((((((.(((((.(((..((((..........................))))..))).))))).))))))))).))))).)))))))))).))))

Structure

    -          u     -         A     C   uc    uucuucuucguc 
agua agaaggcagc gcUAG AAUGCAAAA GUCUG UAc  cgac            a
|||| |||||||||| ||||| ||||||||| ||||| |||  ||||             
ucgu ucuuccgucg cgauc uuacguuuu cggac aug  guug            g
    a          u     c         c     a   uc    uccuccuuauac 

Annotation confidence Not enough data

Genome context

MA_94765: 24183-24300 [+]

Mature pab-miR11485

• Accession: MIMAT0045039
• Description: Picea abies pab-miR11485 mature miRNA
• Sequence: 18 - UAGAAUGCAAAAAGUCUGCUA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918