miRBase entry: pab-MIR11497

Stem-loop pab-MIR11497


Accession
MI0036956
Description
Picea abies pab-MIR11497 precursor miRNA


Sequence

gcaagggauaucagccaUGAACAAGUUGUGUGGAUAUCaacgucuuacagguugcgccaacgugcauaguccgauauauaugcgcacauacgucccacagcacacccuguaaaguguugguaucugcucaauuuguucauggcagacaucccuugc
(((((((((.((.(((((((((((((((.(((((((((((((..(((((((.((.((....(((((((..........)))))))((....))......)).)).)))))))..))))))))))))).))))))))))))))).)).)))))))))

Structure
         a  a               U             uc       u  c  ----------caac       gucc 
gcaagggau uc gccaUGAACAAGUUG GUGGAUAUCaacg  uuacagg ug gc              gugcaua    g
||||||||| || ||||||||||||||| |||||||||||||  ||||||| || ||              |||||||     
cguucccua ag cgguacuuguuuaac cgucuaugguugu  aaugucc ac cg              cgcguau    a
         c  a               u             ga       c  a  acacccugcauaca       auau 


Annotation confidence Not enough data
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Genome context
MA_224220: 3994-4149 [-]

Database links

Mature pab-miR11497

Accession MIMAT0045054
Description Picea abies pab-miR11497 mature miRNA
Sequence 18 - UGAACAAGUUGUGUGGAUAUC - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918