Stem-loop pab-MIR11499a

Accession

MI0036958

Description

Picea abies pab-MIR11499a precursor miRNA

Sequence

ucaugugggaucuugcaUGAAAGGCCACAGUAGGUGAUGgagccaaggaugauuugccgacauccacucauaaucugucuggacaaaugcauauuguacaugacgucaugauagggaaggaaguuggcaauuuguccuuggcuacauaucuugcugugcuucucaugccagaccuuagauga
((((.((((.(((.((((((.((((.((((((((..(((.((((((((((((.((((((((.(((..((....((((((..(((..(((.........)))...)))..)))))))).))).)))))))).)))))))))))).)))..)))))))))))).)))))).))).)))).))))

Structure

    g    a   u      A    C        UG   g            u        a   ac  auaa      ug   -aa   cau 
ucau uggg ucu gcaUGA AGGC ACAGUAGG  AUG agccaaggauga uugccgac ucc  uc    ucuguc  gac   aug   a
|||| |||| ||| |||||| |||| ||||||||  ||| |||||||||||| |||||||| |||  ||    ||||||  |||   |||   u
agua auuc aga cguacu uucg ugucguuc  uac ucgguuccuguu aacgguug agg  ag    ggauag  cug   uac   u
    g    c   c      c    -        ua   a            u        a   -a  ----      ua   cag   aug 

Annotation confidence Not enough data

Genome context

MA_156218: 264-445 [+]

Mature pab-miR11499a

• Accession: MIMAT0045056
• Description: Picea abies pab-miR11499a mature miRNA
• Sequence: 18 - UGAAAGGCCACAGUAGGUGAUG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918