miRBase entry: pab-MIR11504

Stem-loop pab-MIR11504


Accession
MI0036964
Description
Picea abies pab-MIR11504 precursor miRNA


Sequence

gauaauggcaccuccacuUCAACAUGAGGAGGAGCUCAUUcauucaaaaaugaggucuguaugagcucuccucauauugaagucgggguuucucauuauu
((((((((.(((((.(((((((.((((((((.(((((((.((((((....))))...)).))))))))))))))).))))))).)))))...))))))))

Structure
        --c     c       C        G       U  ---    a 
gauaaugg   accuc acuUCAA AUGAGGAG AGCUCAU ca   uuca a
||||||||   ||||| ||||||| |||||||| ||||||| ||   ||||  
uuauuacu   ugggg ugaaguu uacuccuc ucgagua gu   gagu a
        cuu     c       a        -       u  cug    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_10428801: 14032-14131 [-]

Database links

Mature pab-miR11504

Accession MIMAT0045062
Description Picea abies pab-miR11504 mature miRNA
Sequence 19 - UCAACAUGAGGAGGAGCUCAUU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918