miRBase entry: pab-MIR3693b

Stem-loop pab-MIR3693b


Accession
MI0036969
Description
Picea abies pab-MIR3693b precursor miRNA


Sequence

ucgccuuucacuaagguacUCAGGAGCUGCUCGUAGGUGAgggaugcacagaggccuuacucaaacacuugagcagaucuguuuguugaaaacaagcgcucaaauggagcaaacuuccaucuauaagcagcucaugaguaccuucugaaggacguga
((((((((((..((((((((((.((((((((.((((((((((..(((...(((......)))...((.((((((......(((((((...))))))))))))).))..)))..))).))))))).)))))))).)))))))))).))))))..))))

Structure
    --      cu          G        C       -   ga   acagaggccuuacucaaa  c      agaucu       g 
ucgc  cuuuca  aagguacUCA GAGCUGCU GUAGGUG Agg  ugc                  ca uugagc      guuuguu  
||||  ||||||  |||||||||| |||||||| ||||||| |||  |||                  || ||||||      ||||||| a
agug  ggaagu  uuccaugagu cucgacga uaucuac uuc  acg                  gu aacucg      cgaacaa  
    ca      -c          a        a       c   aa   ----------------ag  a      ------       a 


Annotation confidence Not enough data
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Genome context
MA_10139353: 1491-1647 [+]

Database links

Mature pab-miR3693b

Accession MIMAT0045067
Description Picea abies pab-miR3693b mature miRNA
Sequence 20 - UCAGGAGCUGCUCGUAGGUGA - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918