miRBase entry: pab-MIR11511

Stem-loop pab-MIR11511


Accession
MI0036975
Description
Picea abies pab-MIR11511 precursor miRNA


Sequence

cgcuucauaguuaucggUCCAACGAAGAUCAGAAGGCUUcacaucguagaaauccggaccaauaaaggugaagguguuuguaugauguuaagcuucugaccuuuguuggacgaguaaagauggggug
((((((((..((((..(((((((((((.(((((((.(((.((((((((.((((((..(((......)))...)).)))).)))))))).)))))))))).)))))))))))..))))..))))))))

Structure
        ag    cg           A       G   c        g    -  -gg   aa 
cgcuucau  uuau  gUCCAACGAAG UCAGAAG CUU acaucgua aaau cc   acc  u
||||||||  ||||  ||||||||||| ||||||| ||| |||||||| |||| ||   |||   
guggggua  aaug  cagguuguuuc agucuuc gaa uguaguau uuug gg   ugg  a
        ga    ag           c       -   u        g    u  aag   aa 


Annotation confidence Not enough data
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Genome context
MA_30269: 9968-10094 [-]

Database links

Mature pab-miR11511

Accession MIMAT0045073
Description Picea abies pab-miR11511 mature miRNA
Sequence 18 - UCCAACGAAGAUCAGAAGGCUU - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918