Stem-loop pab-MIR11519

Accession

MI0036989

Description

Picea abies pab-MIR11519 precursor miRNA

Sequence

gucaaaucucccauuauuccuuguuuuacgaggucgagcauggugaucucuaaggcucgagcaaugauuaauuugaucccuguguccagcucauguguucacugaaaaucaccagacucaaccUCGUAAAACACAGGAAUGAUGGgagacuuguac
(((((.((((((((((((((((((((((((((((.(((..(((((((.......(((.(((((..(((((...)))))..))).)).)))(((((....)).)))..)))))))..))).))))))))))))).))))))))))))))).))).))

Structure

  -   a               -             c   ca       ----------cucuaag   c  -   au     a 
gu caa ucucccauuauuccu uguuuuacgaggu gag  uggugau                 gcu ga gca  gauua  
|| ||| ||||||||||||||| ||||||||||||| |||  |||||||                 ||| || |||  ||||| u
ca guu agagGGUAGUAAGGA ACAAAAUGCUcca cuc  accacua                 cga cu ugu  cuagu  
  u   c               C             a   ag       aaagucacuuguguacu   c  g   cc     u 

Annotation confidence Not enough data

Genome context

MA_258456: 1682-1837 [+]

Mature pab-miR11519

• Accession: MIMAT0045087
• Description: Picea abies pab-miR11519 mature miRNA
• Sequence: 124 - UCGUAAAACACAGGAAUGAUGG - 145
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918