Stem-loop pab-MIR11525a

Accession

MI0037000

Description

Picea abies pab-MIR11525a precursor miRNA

Sequence

agcacaaacccauuuaaaccuggguuugauaugcuccuugaggacaagaagcucgaaguuguauaccuugaguuccaaguuauuugugugagcuugagauaugcauuauugagcuuagcagUCUCGAGGACCAUAUCAGACCcagguuuagauggguccgcacugcu
(((((..((((((((((((((((((((((((((.(((((((((.....((((((((...((((((.(((((((((((.........)).))))))))).))))))...)))))))).....))))))))).))))))))))))))))))))))))))..)...))))

Structure

    --- aa                          c         acaag        agu      c         -  agu 
agca   c  acccauuuaaaccuggguuugauaug uccuugagg     aagcucga   uguaua cuugaguuc ca   u
||||   |  |||||||||||||||||||||||||| |||||||||     ||||||||   |||||| ||||||||| ||   a
ucgu   g  uggguagauuuggacCCAGACUAUAC AGGAGCUCU     uucgaguu   acguau gaguucgag gu   u
    cac cc                          C         gacga        auu      a         u  guu 

Annotation confidence Not enough data

Genome context

MA_137202: 10780-10946 [-]

Mature pab-miR11525a

• Accession: MIMAT0045098
• Description: Picea abies pab-miR11525a mature miRNA
• Sequence: 122 - UCUCGAGGACCAUAUCAGACC - 142
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918