miRBase entry: pab-MIR11525b

Stem-loop pab-MIR11525b


Accession
MI0037001
Description
Picea abies pab-MIR11525b precursor miRNA


Sequence

agcacaaacccauuuaaaccuggguuugauaugcuccuugaggacaagaagcucgaaguuguauaccuugaguuccaaguuauuugugugagcuugagauaugcauuauugagcuuagcagUCUCGAGGACCAUAUCAGACCcagguuuagauggguccgcacugcu
(((((..((((((((((((((((((((((((((.(((((((((.....((((((((...((((((.(((((((((((.........)).))))))))).))))))...)))))))).....))))))))).))))))))))))))))))))))))))..)...))))

Structure
    --- aa                          c         acaag        agu      c         -  agu 
agca   c  acccauuuaaaccuggguuugauaug uccuugagg     aagcucga   uguaua cuugaguuc ca   u
||||   |  |||||||||||||||||||||||||| |||||||||     ||||||||   |||||| ||||||||| ||   a
ucgu   g  uggguagauuuggacCCAGACUAUAC AGGAGCUCU     uucgaguu   acguau gaguucgag gu   u
    cac cc                          C         gacga        auu      a         u  guu 


Annotation confidence Not enough data
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Genome context
MA_713141: 1912-2078 [-]

Database links

Mature pab-miR11525b

Accession MIMAT0045099
Description Picea abies pab-miR11525b mature miRNA
Sequence 122 - UCUCGAGGACCAUAUCAGACC - 142
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918