miRBase entry: pab-MIR11526

Stem-loop pab-MIR11526


Accession
MI0037002
Description
Picea abies pab-MIR11526 precursor miRNA


Sequence

gguaagggagcaugcuuggcagaguaggauggcaugguuuuuauggcaauuauugagagggaaaggcauauauacaggauucacuccuccggggcguggaagguucccagccaaagcgucucugaUCUCUGCUGCGUAUCGACUCCacaacc
(((...(((((((((.((((((((.....((.((((.....)))).))......((((.(....(((......((....((((((((....))).)))))..)).....)))....).))))....)))))))).)))).).))))...)))

Structure
   aag    - -    u        uaggauggcaugguuuuuauggcaauuauu    g gaaa   auauau  agga     -   u 
ggu   ggag c augc uggcagag                              gaga g    ggc      ac    uucac ucc c
|||   |||| | |||| ||||||||                              |||| |    |||      ||    ||||| |||  
cca   CCUC G UAUG GUCGUCUC                              cucu c    ccg      ug    aggug ggg c
   aca    A C    C        --------------------------Uagu    g gaaa   -acccu  --ga     c   g 


Annotation confidence Not enough data
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Genome context
MA_67422: 5250-5401 [+]

Database links

Mature pab-miR11526

Accession MIMAT0045100
Description Picea abies pab-miR11526 mature miRNA
Sequence 126 - UCUCUGCUGCGUAUCGACUCC - 146
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918