miRBase entry: pab-MIR11527

Stem-loop pab-MIR11527


Accession
MI0037003
Description
Picea abies pab-MIR11527 precursor miRNA


Sequence

cccacgcuguuuuguuuauaucuUCUGAGUAAAGGCACGUUCGGucauuacgagcgugaaauugccaaagaauuuuucgaaaugcccgcacgugccuuuacucagaagauauaaacaaguggg
(((((......(((((((((((((((((((((((((((((.(((.((((.(((....((((((.......))))))))).)))).))).))))))))))))))))))))))))))))))))))

Structure
     gcuguu                             U   u    a   gcgu      gc 
cccac      uuguuuauaucuUCUGAGUAAAGGCACGU CGG cauu cga    gaaauu  c
|||||      ||||||||||||||||||||||||||||| ||| |||| |||    ||||||  a
gggug      aacaaauauagaagacucauuuccgugca gcc guaa gcu    uuuuaa  a
     ------                             c   c    a   ----      ga 


Annotation confidence Not enough data
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Genome context
MA_18404: 91751-91873 [-]

Database links

Mature pab-miR11527

Accession MIMAT0045101
Description Picea abies pab-miR11527 mature miRNA
Sequence 24 - UCUGAGUAAAGGCACGUUCGG - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918