Stem-loop pab-MIR11530

Accession

MI0037008

Description

Picea abies pab-MIR11530 precursor miRNA

Sequence

gccugcuguucuaauuaugUCUUCAUGGACCUCCUUGCCaugggcuaacuugaguaucucuggagcaugccaaggagauccauaaagauguuauuaggagcgggu
(((((((..((((((.(((((((.(((((.(((((((.((((..(((....(((...))))))..)))).))))))).))))).))))))).)))))))))))))

Structure

       gu      u       C     C       C    gg   acuu   u 
gccugcu  ucuaau augUCUU AUGGA CUCCUUG Caug  cua    gag  
|||||||  |||||| ||||||| ||||| ||||||| ||||  |||    ||| a
ugggcga  ggauua uguagaa uaccu gaggaac guac  ggu    cuc  
       --      u       a     a       c    ga   ----   u 

Annotation confidence Not enough data

Genome context

MA_8764075: 1728-1832 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR11530

Mature pab-miR11530

• Accession: MIMAT0045106
• Description: Picea abies pab-miR11530 mature miRNA
• Sequence: 20 - UCUUCAUGGACCUCCUUGCC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918