miRBase entry: pab-MIR11532

Stem-loop pab-MIR11532


Accession
MI0037013
Description
Picea abies pab-MIR11532 precursor miRNA


Sequence

cuUGACAUUGUAAAAGACGGGAAUuaguagugguagccgccuaucccgaaagauucauugaggagaagcucucaauuauucuucccguguuuaacaaugucaag
(((((((((((.(((.(((((((..((((((((.(((......((((((........))).)))...))).)).)))))).))))))).))).)))))))))))

Structure
           A   G       Uu      -  u   cgccua   -   aag 
cuUGACAUUGU AAA ACGGGAA  aguagu gg agc      ucc cga   a
||||||||||| ||| |||||||  |||||| || |||      ||| |||    
gaacuguaaca uuu ugcccuu  uuauua cu ucg      agg guu   u
           a   g       -c      a  c   ---aag   a   acu 


Annotation confidence Not enough data
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Genome context
MA_28910: 67659-67762 [+]

Database links

Mature pab-miR11532

Accession MIMAT0045111
Description Picea abies pab-miR11532 mature miRNA
Sequence 3 - UGACAUUGUAAAAGACGGGAAU - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918