Stem-loop pab-MIR11536

Accession

MI0037021

Description

Picea abies pab-MIR11536 precursor miRNA

Sequence

uaaUGAGGACAUGUGAUUUGGAUGcaugaauguauugggguauuuggaggagguucuccuauucuuuaaggaguuaucguguaacucaucucucuuaucuaucuuggaguuuugcuccaugcucacauugguguacaugguguguacuucuaguuuauuaugauaucuuaagcauuuggauccuaacauuugaacauccaaaucacauguucucaaua
...(((((((((((((((((((((...((((((..((((((.(((((((((((....)))..))))))))(((((((...)))))))..................(((((..(((.(((((..(((....)))..))))).))).)))))..(((((...........)))))......))))))))))))...)))))))))))))))))))))...

Structure

uaa                     cau      au      auuuggaggagguucuccuauucuuuaaggaguuaucguguaacucaucucucuuaucuaucuu     uu   u     cu   a 
   UGAGGACAUGUGAUUUGGAUG   gaaugu  uggggu                                                                ggagu  ugc ccaug  cac u
   |||||||||||||||||||||   ||||||  ||||||                                                                |||||  ||| |||||  |||  
   acucuuguacacuaaaccuac   uuuaca  auccua                                                                cuuca  gug gguac  gug u
aua                     aag      --      -----------------------------------gguuuacgaauucuauaguauuauuugau     -u   u     au   g 

Annotation confidence Not enough data

Genome context

MA_16172: 44664-44881 [+]

Mature pab-miR11536

• Accession: MIMAT0045119
• Description: Picea abies pab-miR11536 mature miRNA
• Sequence: 4 - UGAGGACAUGUGAUUUGGAUG - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918