Stem-loop pab-MIR11533b

Accession

MI0037022

Description

Picea abies pab-MIR11533b precursor miRNA

Sequence

gccguuuuugcaugauauaguUGAUAAGUUUCUCAUCUUCCUcacuuuuucaugugcggagccgagccgagaagaggucucugcucacccacccgaugaagaugagauuuaucaacuguaucaugaaaaacggc
(((((((((.((((((((((((((((((..((((((((((.((..........(((.(((((.(((((.......)).))).)))).).)))..)).)))))))))))))))))))))))))))))))))))))

Structure

         g                  UU          C  acuuuuucau   c -    c   -  ga 
gccguuuuu caugauauaguUGAUAAG  UCUCAUCUUC Uc          gug g gagc gag cc  g
||||||||| ||||||||||||||||||  |||||||||| ||          ||| | |||| ||| ||  a
cggcaaaaa guacuaugucaacuauuu  agaguagaag ag          cac c cucg cuc gg  a
         -                  --          u  --------cc   c a    u   u  ag 

Annotation confidence Not enough data

Genome context

MA_301783: 759-892 [-]

Mature pab-miR11533b

• Accession: MIMAT0045120
• Description: Picea abies pab-miR11533b mature miRNA
• Sequence: 22 - UGAUAAGUUUCUCAUCUUCCU - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918