miRBase entry: pab-MIR11552

Stem-loop pab-MIR11552


Accession
MI0037046
Description
Picea abies pab-MIR11552 precursor miRNA


Sequence

uuucggauccaucgcauagguuuuaUGUUUUUCGACGUUUUGGACCaaacuagugugguccaucaucaggaaagcgugugguuucaaaaaacgcuuuccugaugauggaccacacuaguuuaguccgaaacgucgaaaaacauaaaaccuaugcgauggaucugaaa
.((((((((((((((((((((((((((((((((((((((((((((.(((((((((((((((((((((((((((((((.............))))))))))))))))))))))))))))))).)))))))))))))))))))))))))))))))))))))))))))).

Structure
u                                            C                               guggu 
 uucggauccaucgcauagguuuuaUGUUUUUCGACGUUUUGGAC aaacuagugugguccaucaucaggaaagcgu     u
 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     u
 aagucuagguagcguauccaaaauacaaaaagcugcaaagccug uuugaucacaccagguaguaguccuuucgca     c
a                                            a                               aaaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_17683: 18334-18500 [-]

Database links

Mature pab-miR11552

Accession MIMAT0045144
Description Picea abies pab-miR11552 mature miRNA
Sequence 26 - UGUUUUUCGACGUUUUGGACC - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918