Stem-loop pab-MIR11409e

Accession

MI0037049

Description

Picea abies pab-MIR11409e precursor miRNA

Sequence

accaauguagauccaucUUAACUCCGGAUCUAUUAUGCacagagagggaucaagucccucaaaguaaaaacuuuuuuuagauugaaaaaacuugagaaaaaguuugcaucucaagggauuuugaucccucugggcgcaugauagaucuggacuuaaaauggaucuacauuggu
((((((((((((((((.((((.((((((((((((((((.(..(((((((((((((((((........(((((((((((((.((....)).))..)))))))))))........))))).))))))))))))..).)))))))))))))))).)))).))))))))))))))))

Structure

                c    C                a ag            -     caaaguaa           --  a  g 
accaauguagauccau UUAA UCCGGAUCUAUUAUGC c  agagggaucaag ucccu        aaacuuuuuuu  ag uu a
|||||||||||||||| |||| |||||||||||||||| |  |||||||||||| |||||        |||||||||||  || ||  
ugguuacaucuaggua aauu aggucuagauaguacg g  ucucccuaguuu aggga        uuugaaaaaga  uc aa a
                a    c                c gg            u     acucuacg           gu  a  a 

Annotation confidence Not enough data

Genome context

MA_91212: 11276-11448 [+]

Mature pab-miR11409e

• Accession: MIMAT0045147
• Description: Picea abies pab-miR11409e mature miRNA
• Sequence: 18 - UUAACUCCGGAUCUAUUAUGC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918