Stem-loop pab-MIR11555

Accession

MI0037050

Description

Picea abies pab-MIR11555 precursor miRNA

Sequence

uauaaaccagcauagaucaaucUUAACUCCGGAUCUUUUAAGCacucagagauuugcacuuggguuguuuuuuauccaucuccgcccuuaauagaucuggaguuaagauggaucuacacuggugugua
((((.(((((..((((((.(((((((((((((((((.(((((..(...((((........(((((........))))))))).)..))))).))))))))))))))))).))))))..))))).))))

Structure

    a     ca      a                 U     Ca uca    uuugcacu     ugu 
uaua accag  uagauc aucUUAACUCCGGAUCU UUAAG  c   gaga        ugggu   u
|||| |||||  |||||| ||||||||||||||||| |||||  |   ||||        |||||    
augu ugguc  aucuag uagaauugaggucuaga aauuc  g   cucu        accua   u
    g     ac      g                 u     cc --c    --------     uuu 

Annotation confidence Not enough data

Genome context

MA_2961962: 244-371 [+]

Mature pab-miR11555

• Accession: MIMAT0045148
• Description: Picea abies pab-miR11555 mature miRNA
• Sequence: 23 - UUAACUCCGGAUCUUUUAAGC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918