miRBase entry: pab-MIR11562b

Stem-loop pab-MIR11562b


Accession
MI0037059
Description
Picea abies pab-MIR11562b precursor miRNA


Sequence

gugccaugccagcaaUUCUGAUAAUGCUUCACCCUCAaugcccaauuuuaauuacaucaauuucacugcugcgcagauugggcagugagggugaaucauuacagaauuaguggcaguguac
((((..(((((..(((((((.(((((.((((((((((.((((((((...................((((...)))))))))))).)))))))))).))))))))))))..)))))..))))

Structure
    ca     gc       A     C          a        uuuaauuacaucaauuuca    u 
gugc  ugcca  aaUUCUG UAAUG UUCACCCUCA ugcccaau                   cugc  
||||  |||||  ||||||| ||||| |||||||||| ||||||||                   |||| g
caug  acggu  uuaagac auuac aagugggagu acggguua                   gacg  
    ug     ga       -     u          g        -------------------    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MA_8415984: 3059-3179 [+]

Database links

Mature pab-miR11562b

Accession MIMAT0045157
Description Picea abies pab-miR11562b mature miRNA
Sequence 16 - UUCUGAUAAUGCUUCACCCUCA - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918