miRBase entry: pab-MIR11564a

Stem-loop pab-MIR11564a


Accession
MI0037067
Description
Picea abies pab-MIR11564a precursor miRNA


Sequence

aucagucaauggaaguccacagauUUGACCACAAAAUCCACAUUGucuucuggguuuuguuuucagaggaaaaaaugagucuuaauguggauguuggggucaaaucuaugggguuuccaucgauugau
(((((((.((((((.((((.((((((((((.(((.(((((((((((((((((((.......)))))))))............)))))))))).))).)))))))))).))))..)))))).)))))))

Structure
       a      -g    c          A   A          ------------         uu 
aucaguc auggaa  ucca agauUUGACC CAA AUCCACAUUG            ucuucuggg  u
||||||| ||||||  |||| |||||||||| ||| ||||||||||            |||||||||  u
uaguuag uaccuu  gggu ucuaaacugg guu uagguguaau            aggagacuu  g
       c      ug    a          g   g          ucugaguaaaaa         uu 


Annotation confidence Not enough data
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Genome context
MA_114913: 16283-16410 [-]

Database links

Mature pab-miR11564a

Accession MIMAT0045165
Description Picea abies pab-miR11564a mature miRNA
Sequence 25 - UUGACCACAAAAUCCACAUUG - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918