miRBase entry: pab-MIR11573a

Stem-loop pab-MIR11573a


Accession
MI0037081
Description
Picea abies pab-MIR11573a precursor miRNA


Sequence

ccgguucuuggaccuucggccaaaaUUGGGGAGCGUAUUGUAGAUUgaaaacuuguggauuucagggagugcaguuuugaaucuauaauacucuccaccaguuucggucgaaggcccaagagcugg
(((((((((((.(((((((((.(((((((((((.((((((((((((.((((((...(.((((....)))).))))))).)))))))))))).)))).))))))).))))))))).)))))))))))

Structure
           a         a       -    C            g      ugu g    c 
ccgguucuugg ccuucggcc aaaUUGG GGAG GUAUUGUAGAUU aaaacu   g auuu a
||||||||||| ||||||||| ||||||| |||| |||||||||||| ||||||   | ||||  
ggucgagaacc ggaagcugg uuugacc ccuc cauaauaucuaa uuuuga   c ugag g
           c         c       a    u            g      --- g    g 


Annotation confidence Not enough data
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Genome context
MA_5969311: 914-1039 [-]

Database links

Mature pab-miR11573a

Accession MIMAT0045179
Description Picea abies pab-miR11573a mature miRNA
Sequence 26 - UUGGGGAGCGUAUUGUAGAUU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918