miRBase entry: pab-MIR11420d

Stem-loop pab-MIR11420d


Accession
MI0037083
Description
Picea abies pab-MIR11420d precursor miRNA


Sequence

accaguUUGGUACCGAACCGGCUGAGUcgaagaacaacucggccaguucgguaccaaaccggu
(((.((((((((((((((.((((((((.(.....).)))))))).)))))))))))))).)))

Structure
   a              C        c a 
acc guUUGGUACCGAAC GGCUGAGU g a
||| |||||||||||||| |||||||| | g
ugg caaaccauggcuug ccggcuca c a
   c              a        a a 


Annotation confidence Not enough data
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Genome context
MA_18671: 16445-16507 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pab-MIR11420d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pab-miR11420d

Accession MIMAT0045181
Description Picea abies pab-miR11420d mature miRNA
Sequence 7 - UUGGUACCGAACCGGCUGAGU - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918