Stem-loop fhe-mir-61

Accession

MI0037102

Description

Fasciola hepatica fhe-mir-61 precursor miRNA

Sequence

ugugagucucuuucuuguccaugguaccaguucgauugagaacgaucugugcgucguguuucgugucacaccacaguucaucucauacguaacuccauacugccugagccagccAUGACUAGAAAGUGCACUCACUUc
.(((((((.((((((.(((.(((((...((((((..(((((..((.(((((.((.(((........)))))))))).)).)))))..)).)))).......((....))..)))))))).)))))).).))))))...

Structure

--u      - u      u   c     --------------acc    -  au     ac  u     c  c   uuu 
   gugagu c cuuucu guc auggu                 aguu cg  ugaga  ga cugug gu gug   c
   |||||| | |||||| ||| |||||                 |||| ||  |||||  || ||||| || |||    
   CACUCA G GAAAGA CAG UAccg                 ucaa gc  acucu  cu gacac ca cac   g
cUU      C U      U   -     accgaguccgucauacc    u  au     -a  u     -  -   ugu 

Annotation confidence Not enough data

Genome context

scaffold1123: 381790-381927 [+]

Mature fhe-miR-61

• Accession: MIMAT0045200
• Description: Fasciola hepatica fhe-miR-61 mature miRNA
• Sequence: 115 - AUGACUAGAAAGUGCACUCACUU - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26432296
   The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
   "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
   "Int J Parasitol (2015) 45:901-913