miRBase entry: fhe-mir-31

Stem-loop fhe-mir-31


Accession
MI0037116
Description
Fasciola hepatica fhe-mir-31 precursor miRNA


Sequence

UGGCAAGAUUAUGGCGAAGCUGAguguuaauaguguccagcuacaccauauuuugcccacgg
.((((((((.((((.(.(((((...............))))).).)))))))))))).....

Structure
----U        U    C A     Aguguu 
     GGCAAGAU AUGG G AGCUG      a
     |||||||| |||| | |||||      a
     ccguuuua uacc c ucgac      u
ggcac        -    a a     cuguga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold2741: 181657-181718 [+]

Database links

Mature fhe-miR-31

Accession MIMAT0045214
Description Fasciola hepatica fhe-miR-31 mature miRNA
Sequence 1 - UGGCAAGAUUAUGGCGAAGCUGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26432296
    The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
    "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
    "Int J Parasitol (2015) 45:901-913