Stem-loop sequence fhe-mir-71a

AccessionMI0037120 (change log)
DescriptionFasciola hepatica miR-71a stem-loop
Literature search

2 open access papers mention fhe-mir-71a
(3 sentences)

Stem-loop
   --u        au     u      caa    u 
5'    gaaagacg  gguag gagaug   aacg u
      ||||||||  ||||| ||||||   |||| u
3'    uuuucugc  ccauc cucuac   uugc g
   guc        -c     c      ---    c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Fhepatica_v1; GCA_000947175.1) Overlapping transcripts
scaffold879: 28077-28139 [+]
intergenic
Clustered miRNAs
< 10kb from fhe-mir-71a
fhe-mir-71ascaffold879: 28077-28139 [+]
fhe-mir-2ascaffold879: 28178-28232 [+]
fhe-mir-2bscaffold879: 28276-28327 [+]
fhe-mir-2escaffold879: 28368-28423 [+]
Database links

Mature sequence fhe-miR-71a

Accession MIMAT0045218
Sequence

1 - 

ugaaagacgaugguagugagaug

 - 23

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26432296 "The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms" Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M Int J Parasitol. 45:901-913(2015).