miRBase entry: fhe-mir-3479

Stem-loop fhe-mir-3479


Accession
MI0037129
Description
Fasciola hepatica fhe-mir-3479 precursor miRNA

Literature search
1 open access papers mention fhe-mir-3479
(2 sentences)

Sequence

cggcggaggcuuuugcaauguaucuagcggaauGUAUUGCACUUUCCUUCGCCUUA
.((((((((....((((((((((((...)).))))))))))....))))))))...

Structure
--c        cuuu          -  a 
   ggcggagg    ugcaauguau cu  
   ||||||||    |||||||||| || g
   CCGCUUCC    ACGUUAUGua gg  
AUU        UUUC          a  c 


Annotation confidence Not enough data
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Genome context
scaffold4876: 38045-38100 [-]

Database links

Mature fhe-miR-3479

Accession MIMAT0045227
Description Fasciola hepatica fhe-miR-3479 mature miRNA
Sequence 34 - GUAUUGCACUUUCCUUCGCCUUA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26432296
    The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
    "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
    "Int J Parasitol (2015) 45:901-913