miRBase entry: fhe-let-7

Stem-loop fhe-let-7


Accession
MI0037130
Description
Fasciola hepatica fhe-let-7 precursor miRNA

Literature search
2 open access papers mention fhe-let-7
(6 sentences)

Sequence

auucggcGAGAGGUAGUGACUCAUAUGACUuuaccaauugucuuggcgaaaucugagacaguugugucuaaguacucucuuuuacucgcuaccucguugucug
....(((((((((((((((........((((.((((((((((((((......)))))))))))).))..))))............)))))))))).)))))..

Structure
auuc     -          ----CUCAUAUG    -u  -            cg 
    ggcGA GAGGUAGUGA            ACUu  ac caauugucuugg  a
    ||||| ||||||||||            ||||  || ||||||||||||   
    cuguu cuccaucgcu            ugaa  ug guugacagaguc  a
--gu     g          cauuuucucuca    uc  u            ua 


Annotation confidence Not enough data
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Genome context
scaffold112: 524162-524264 [+]

Database links

Mature fhe-let-7

Accession MIMAT0045228
Description Fasciola hepatica fhe-let-7 mature miRNA
Sequence 8 - GAGAGGUAGUGACUCAUAUGACU - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26432296
    The miRnome of Fasciola hepatica juveniles endorses the existence of a reduced set of highly divergent micro RNAs in parasitic flatworms
    "Fontenla S, Dell'Oca N, Smircich P, Tort JF, Siles-Lucas M"
    "Int J Parasitol (2015) 45:901-913