Stem-loop apl-mir-11589

Accession

MI0037139

Description

Anas platyrhynchos apl-mir-11589 precursor miRNA

Sequence

GAGGGUCUGCAGAUUUCAGCCcacccaguaaaguggCUGAAAAACUGCAGCACUCCCGGA
(.((((((((((.((((((((.((........))))))))))..)))))).)))).)...

Structure

--- A    -      -A        c  cca 
   G GGGU CUGCAG  UUUCAGCC ac   g
   | |||| ||||||  |||||||| ||    
   C CUCA GACGUC  AAAGUCgg ug   u
AGG C    C      AA        -  aaa 

Annotation confidence Not enough data

Genome context

scaffold171: 641854-641913 [+]

Mature apl-miR-11589-5p

• Accession: MIMAT0045238
• Description: Anas platyrhynchos apl-miR-11589-5p mature miRNA
• Sequence: 1 - GAGGGUCUGCAGAUUUCAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature apl-miR-11589-3p

• Accession: MIMAT0045239
• Description: Anas platyrhynchos apl-miR-11589-3p mature miRNA
• Sequence: 37 - CUGAAAAACUGCAGCACUCCCGGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26369256
   Identification and profiling of microRNAs associated with white and black plumage pigmentation in the white and black feather bulbs of ducks by RNA sequencing
   "Apopo S, Liu H, Jing L, Du X, Xie S, Gong Y, Xu R, Li S"
   "Anim Genet (2015) 46:627-635