miRBase entry: pab-MIR3698b

Stem-loop pab-MIR3698b


Accession
MI0037142
Description
Picea abies pab-MIR3698b precursor miRNA


Sequence

guucaaugucuugcuggacuugcaacucuacuuugccuauggcagugugcuauaagcuaaggcagagagcgucucccaUAAGCCAAGGCAGAGUUGCAAGuacagccagaugaac
(((((...(((.((((.((((((((((((.((((((.(((((.((..((((....((....))....)))).)).))))).).))))).)))))))))))).)))).))))))))

Structure
     aug   u    g            a     - c     c  ug    auaa  u 
guuca   ucu gcug acuugcaacucu cuuug c uaugg ag  ugcu    gc a
|||||   ||| |||| |||||||||||| ||||| | ||||| ||  ||||    ||  
caagu   aga cgac uGAACGUUGAGA GGAAC G AUacc uc  gcga    cg a
     ---   c    a            C     C A     c  -u    gaga  g 


Annotation confidence Not enough data
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Genome context
MA_916243: 6352-6466 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pab-MIR3698b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pab-miR3698b

Accession MIMAT0045244
Description Picea abies pab-miR3698b mature miRNA
Sequence 79 - UAAGCCAAGGCAGAGUUGCAAG - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918