Stem-loop pab-MIR858a

Accession

MI0037145

Description

Picea abies pab-MIR858a precursor miRNA

Literature search

1 open access papers mention pab-MIR858a
(1 sentences)

Sequence

gcaguuguucuuuuaUUCGUUGUCUGUUCGACCCUGugcuuaucauucuuuaucgucauuaucuacaucugaauauuguuucuagaucuggaauaauuaucugaaaauuuguauggagaugcaccagauuguaggacaaccaaaaaauauauaugc
(((..(((..((((....(((((((...(((.(..((((............(((.((((........((.((..((((((((.......))))))))..)).))........)))).)))))))..).)))..)))))))..))))..)))..)))

Structure

   gu   uc    aUUC       GUU   C CU    uuaucauucuuu   g    uaucuaca  u  au        ua 
gca  ugu  uuuu    GUUGUCU   CGA C  Gugc            auc ucau        uc ga  auuguuuc  g
|||  |||  ||||    |||||||   ||| |  ||||            ||| ||||        || ||  ||||||||  a
cgu  aua  aaaa    caacagg   guu g  cacg            uag ggua        ag cu  uaauaagg  u
   au   ua    --ac       -au   a ac    ------------   a    uguuuaaa  u  au        uc 

Annotation confidence Not enough data

Genome context

MA_100770: 7541-7696 [+]

Mature pab-miR858a

• Accession: MIMAT0045247
• Description: Picea abies pab-miR858a mature miRNA
• Sequence: 16 - UUCGUUGUCUGUUCGACCCUG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918