miRBase entry: cas-MIR164

Stem-loop cas-MIR164


Accession
MI0037184
Description
Camelina sativa cas-MIR164 precursor miRNA

Literature search
0 open access papers mention cas-MIR164
(0 sentences)

Sequence

guUGGAGAAGCAGGGCACGUGCAaaccaacaaagacgaaauccgucucaugugcuuugcacguacuccccuucuccaac
((((((((((..(((.(((((((((.((....(((((.....)))))....)).))))))))).)))..))))))))))

Structure
          CA   C         c  acaa     a 
guUGGAGAAG  GGG ACGUGCAaa ca    agacg a
||||||||||  ||| ||||||||| ||    ||||| a
caaccucuuc  cuc ugcacguuu gu    ucugc u
          cc   a         c  guac     c 


Annotation confidence Not enough data
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Genome context
chr5: 257645-257723 [-]

Database links

Mature cas-miR164

Accession MIMAT0045295
Description Camelina sativa cas-miR164 mature miRNA
Sequence 3 - UGGAGAAGCAGGGCACGUGCA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25826400
    Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
    Poudel S, Aryal N, Lu C
    PLoS One (2015) 10:e0121542