Stem-loop cas-MIR400

Accession

MI0037231

Description

Camelina sativa cas-MIR400 precursor miRNA

Sequence

guuUAUGAGAGUAUUAUAAGUCACugcauuuugguaagcagcauggaguuugcuuccuagacgaagugacuuauaauauucucaugaau
(((((((((((((((((((((((((....(((((.((((((........)))))).)))))...)))))))))))))))))))))))))

Structure

                         gcau     u      cau 
guuUAUGAGAGUAUUAUAAGUCACu    uuugg aagcag   g
|||||||||||||||||||||||||    ||||| ||||||    
uaaguacucuuauaauauucaguga    agauc uucguu   g
                         -agc     c      uga 

Annotation confidence Not enough data

Genome context

chr17: 19090407-19090495 [+]

Mature cas-miR400

• Accession: MIMAT0045354
• Description: Camelina sativa cas-miR400 mature miRNA
• Sequence: 4 - UAUGAGAGUAUUAUAAGUCAC - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542