miRBase entry: cas-MIR825

Stem-loop cas-MIR825


Accession
MI0037235
Description
Camelina sativa cas-MIR825 precursor miRNA

Literature search
1 open access papers mention cas-MIR825
(1 sentences)

Sequence

guUCAAGCACCAGCUCGAAGAAGCguaacuaguuuaucuuaagaaaucauggaucugaaaaagcuacgcuucucgagaaggugcgugagc
(((((.(((((..(((((.((((((((.((..(((((((...........))))..)))..)).)))))))))))))..))))).)))))

Structure
     A     AG     A        a  ag   --    uaag 
guUCA GCACC  CUCGA GAAGCgua cu  uuu  aucu    a
||||| |||||  ||||| |||||||| ||  |||  ||||    a
cgagu cgugg  gagcu cuucgcau ga  aag  uagg    a
     g     aa     -        c  aa   uc    uacu 


Annotation confidence Not enough data
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Genome context
chr7: 28990521-28990610 [+]

Database links

Mature cas-miR825

Accession MIMAT0045358
Description Camelina sativa cas-miR825 mature miRNA
Sequence 3 - UCAAGCACCAGCUCGAAGAAGC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25826400
    Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
    Poudel S, Aryal N, Lu C
    PLoS One (2015) 10:e0121542