miRBase entry: cas-MIR860

Stem-loop cas-MIR860


Accession
MI0037241
Description
Camelina sativa cas-MIR860 precursor miRNA


Sequence

aauauauauuguccaaucuauugaaguacuagcacaccagcucuaauaagcugaugugguugaguaguUCAAUAGAUUGGACUAUAUAUauu
(((((((((.(((((((((((((((.((((..((((.(((((......))))).))))....)))).))))))))))))))).)))))))))

Structure
         u               g    --ag    c     cu 
aauauauau guccaaucuauugaa uacu    caca cagcu  a
||||||||| ||||||||||||||| ||||    |||| |||||   
uuaUAUAUA CAGGUUAGAUAACUu auga    gugu gucga  a
         U               g    guug    a     au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 10855613-10855704 [+]

Database links

Mature cas-miR860

Accession MIMAT0045364
Description Camelina sativa cas-miR860 mature miRNA
Sequence 69 - UCAAUAGAUUGGACUAUAUAU - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25826400
    Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
    Poudel S, Aryal N, Lu C
    PLoS One (2015) 10:e0121542