miRBase entry: bdo-mir-2c

Stem-loop bdo-mir-2c

Accession

MI0037250

Description

Bactrocera dorsalis bdo-mir-2c precursor miRNA

Literature search

1 open access papers mention bdo-mir-2c
(2 sentences)

Sequence

ucaucaaaaagggcuguuguagauauucuguaacugagaaguaUCACAGCCAGCUUUGAUGAGCA
((((((((...((((((....((((((((.......)).))))))))))))...))))))))...

Structure

---        aag      ugua      -  gu 
   ucaucaaa   ggcugu    gauauu cu  a
   ||||||||   ||||||    |||||| ||  a
   AGUAGUUU   CCGACA    CUauga ga  c
ACG        CGA      ----      a  gu

Annotation confidence Not enough data

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Genome context

scaffold00020: 1019361-1019425 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-2c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bdo-miR-2c

Accession	MIMAT0045373
Description	Bactrocera dorsalis bdo-miR-2c mature miRNA
Sequence	44 - UCACAGCCAGCUUUGAUGAGCA - 65
Evidence	experimental Torrent [1]

References

PubMed ID: 26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740