Stem-loop bdo-mir-275

Accession

MI0037271

Description

Bactrocera dorsalis bdo-mir-275 precursor miRNA

Literature search

1 open access papers mention bdo-mir-275
(2 sentences)

Sequence

cgcgcuaaucagugaccggggcuggguuguuaucuaaggcagUCAGGUACCUGAAGUAGCGCGCG
(((((((.((((..(((..(((((...............))))).)))..))))..)))))))..

Structure

--       -a    ug   gg     gguugu 
  cgcgcua  ucag  acc  ggcug      u
  |||||||  ||||  |||  |||||      a
  GCGCGAU  AGUC  UGG  CUgac      u
GC       GA    CA   -A     ggaauc 

Annotation confidence Not enough data

Genome context

scaffold03687: 2784-2848 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-275

Mature bdo-miR-275

• Accession: MIMAT0045394
• Description: Bactrocera dorsalis bdo-miR-275 mature miRNA
• Sequence: 43 - UCAGGUACCUGAAGUAGCGCGCG - 65
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740