miRBase entry: bdo-mir-iab-4

Stem-loop bdo-mir-iab-4

Accession

MI0037273

Description

Bactrocera dorsalis bdo-mir-iab-4 precursor miRNA

Sequence

ACGUAUACUGAAUGUAUCCUGAguguauacuauccgguauaccuucaguauacguaaca
((((((((((((.((((((.((..(....)..)).)).)))).))))))))))))....

Structure

----            U    -  U  gu u 
    ACGUAUACUGAA GUAU CC GA  g a
    |||||||||||| |||| || ||  |  
    ugcauaugacuu caua gg cu  c u
acaa            c    u  c  au a

Annotation confidence Not enough data

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Genome context

scaffold00063: 390049-390107 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-iab-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bdo-miR-iab-4

Accession	MIMAT0045396
Description	Bactrocera dorsalis bdo-miR-iab-4 mature miRNA
Sequence	1 - ACGUAUACUGAAUGUAUCCUGA - 22
Evidence	experimental Torrent [1]

References

PubMed ID: 26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740