miRBase entry: bdo-mir-9c

Stem-loop bdo-mir-9c


Accession
MI0037274
Description
Bactrocera dorsalis bdo-mir-9c precursor miRNA


Sequence

UCUUUGGUAUUCUAGCUGUAGAuucuuaaauaugcuaucaucuaaagcuuuuauaccaaagcuc
.(((((((((...((((.(((((................))))).))))...)))))))))...

Structure
--U         UCU    G     ucuuaaa 
   CUUUGGUAU   AGCU UAGAu       u
   |||||||||   |||| |||||        
   gaaaccaua   ucga aucua       a
cuc         uuu    a     cuaucgu 


Annotation confidence Not enough data
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Genome context
scaffold00027: 1324097-1324160 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from bdo-mir-9c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-9c

Accession MIMAT0045397
Description Bactrocera dorsalis bdo-miR-9c mature miRNA
Sequence 1 - UCUUUGGUAUUCUAGCUGUAGA - 22
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740