miRBase entry: bdo-mir-79

Stem-loop bdo-mir-79


Accession
MI0037278
Description
Bactrocera dorsalis bdo-mir-79 precursor miRNA


Sequence

gcuuuggcgcuuuagcuguaugauagauuugacuacuucaUAAAGCUAGAUUACCAAAGCAU
(((((((...(((((((.((((((((......)))..))))).)))))))...)))))))..

Structure
--       cgc       g     --   au 
  gcuuugg   uuuagcu uauga  uag  u
  |||||||   ||||||| |||||  |||   
  CGAAACC   AGAUCGA AUacu  auc  u
UA       AUU       A     uc   ag 


Annotation confidence Not enough data
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Genome context
scaffold00027: 1321252-1321313 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from bdo-mir-79
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-79

Accession MIMAT0045401
Description Bactrocera dorsalis bdo-miR-79 mature miRNA
Sequence 41 - UAAAGCUAGAUUACCAAAGCAU - 62
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740