miRBase entry: bdo-mir-2a-1

Stem-loop bdo-mir-2a-1


Accession
MI0037280
Description
Bactrocera dorsalis bdo-mir-2a-1 precursor miRNA

Literature search
1 open access papers mention bdo-mir-2a-1
(4 sentences)

Sequence

ucucacaaagugguugugaaaugcucuauuugaaacugcaUAUCACAGCCAGCUUUGAUGAGCU
.((((((((((((((((((.((((.............)))).))))))))).))))).))))..

Structure
-u    -     -         a    ucuau 
  cuca caaag ugguuguga augc     u
  |||| ||||| ||||||||| ||||     u
  GAGU GUUUC ACCGACACU Uacg     g
UC    A     G         A    ucaaa 


Annotation confidence Not enough data
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Genome context
scaffold00002: 2204625-2204688 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bdo-mir-2a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-2a

Accession MIMAT0045403
Description Bactrocera dorsalis bdo-miR-2a mature miRNA
Sequence 41 - UAUCACAGCCAGCUUUGAUGAGCU - 64
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740