miRBase entry: bdo-mir-2a-2

Stem-loop bdo-mir-2a-2


Accession
MI0037294
Description
Bactrocera dorsalis bdo-mir-2a-2 precursor miRNA

Literature search
1 open access papers mention bdo-mir-2a-2
(4 sentences)

Sequence

ccucaucaagugguugugauauggauucucaacgcauaUCACAGCCAGCUUUGAUGAGCUA
.((((((((((((((((((((((...........)))))))))))))..)))))))))...

Structure
--c         --             gauu 
   cucaucaag  ugguugugauaug    c
   |||||||||  |||||||||||||    u
   GAGUAGUUU  ACCGACACUauac    c
AUC         CG             gcaa 


Annotation confidence Not enough data
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Genome context
scaffold00002: 2204162-2204222 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bdo-mir-2a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-2a-2

Accession MIMAT0045417
Description Bactrocera dorsalis bdo-miR-2a-2 mature miRNA
Sequence 39 - UCACAGCCAGCUUUGAUGAGCUA - 61
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740