miRBase entry: bdo-mir-994

Stem-loop bdo-mir-994


Accession
MI0037304
Description
Bactrocera dorsalis bdo-mir-994 precursor miRNA

Literature search
1 open access papers mention bdo-mir-994
(5 sentences)

Sequence

UAAGGAAAUAGUAGCCGUGAUuuuauucaacucgaaguguuugcauaucacaguugcuguuucuuuuagau
.((((((((((((((.(((((........(((...)))........))))).)))))))))))))).....

Structure
----U              C     uuuauuca   c 
     AAGGAAAUAGUAGC GUGAU        acu  
     |||||||||||||| |||||        ||| g
     uuucuuugucguug cacua        uga  
uagau              a     uacguuug   a 


Annotation confidence Not enough data
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Genome context
scaffold00147: 463833-463903 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdo-mir-994
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bdo-miR-994

Accession MIMAT0045427
Description Bactrocera dorsalis bdo-miR-994 mature miRNA
Sequence 1 - UAAGGAAAUAGUAGCCGUGAU - 21
Evidence experimental
Torrent [1]

References

  1. PubMed ID: 26438165
    MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
    Calla B, Geib SM
    BMC Genomics (2015) 16:740