Stem-loop bdo-mir-318

Accession

MI0037315

Description

Bactrocera dorsalis bdo-mir-318 precursor miRNA

Literature search

1 open access papers mention bdo-mir-318
(2 sentences)

Sequence

agauauaccaaguucaguuuuguucaaaugauuguucuguugccuuucaUCACUGGGCUUUGUUUAUCUCA
(((((.((.(((((((((..((..(((..((....))..))).....))..))))))))).)).)))))..

Structure

--     u  c         uu  ---uu   au  u 
  agaua ac aaguucagu  ug     caa  ga u
  ||||| || |||||||||  ||     |||  ||  
  UCUAU UG UUCGGGUCA  ac     guu  cu g
AC     U  U         CU  uuucc   gu  u 

Annotation confidence Not enough data

Genome context

scaffold00147: 463660-463730 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-318

Mature bdo-miR-318

• Accession: MIMAT0045437
• Description: Bactrocera dorsalis bdo-miR-318 mature miRNA
• Sequence: 50 - UCACUGGGCUUUGUUUAUCUCA - 71
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740