Stem-loop pla-MIR11598

Accession

MI0037330

Description

Paeonia lactiflora pla-MIR11598 precursor miRNA

Literature search

1 open access papers mention pla-MIR11598
(1 sentences)

Sequence

auauagugauUCGUUCAAAGUAGGUUGUCAAacagacaugugagaccuuuuccuuuguuuuuuuuaaccguuuguuauucccuuugguuuuuauuucucuuucucucuccauuuuuucuuuucuuuacucuuucugucagguugcccggacccgucagacaguucaagugaacuauuuuuuccuaugcaagccaaugucaaauuugacucuugcuuugaagaggucguuggcuaaau
...((((((((..(((((((((((..((((((..(((((..(((((..........)))))...((((.....)))).......((((((.(((......................................((((.(.((((.....)))).).)))).(((((....)))))..........))).)))))))))))...)))))).)))))))))))..))))....))))...

Structure

aua    ----    CG           UU      -ca     gugagaccuuuuccuuuguuuuuuuuaaccguuuguuauucccuu      u   uucucuuucucucuccauuuuuucuuuucuuuacucuu    u a    g 
   uagu    gauU  UUCAAAGUAGG  GUCAAa   gacau                                             ugguuu uau                                      ucug c gguu c
   ||||    ||||  |||||||||||  ||||||   |||||                                             |||||| |||                                      |||| | |||| c
   aucg    cugg  aaguuucguuc  caguuu   cugua                                             accgaa gua                                      agac g ccag c
uaa    guug    ag           -u      aaa     ---------------------------------------------      c   -------------uccuuuuuuaucaagugaacuugac    u c    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature pla-miR11598

• Accession: MIMAT0045451
• Description: Paeonia lactiflora pla-miR11598 mature miRNA
• Sequence: 11 - UCGUUCAAAGUAGGUUGUCAA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26393656
   Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
   Zhao D, Gong S, Hao Z, Tao J
   Genes (Basel) (2015) 6:918-934