Stem-loop pla-MIR11601

Accession

MI0037333

Description

Paeonia lactiflora pla-MIR11601 precursor miRNA

Literature search

1 open access papers mention pla-MIR11601
(4 sentences)

Sequence

cauaccaagaUGCUCUAAAAGAUCGUAGUUCucaagaaaagguacaaaauaaaaauaaauaaauaaaaacauuaaaaaacaacauuacgauguuuaauuuugagcaaaaguugcaccucccuuaaaaaaauuaauuaauaaaucauguauuuaaauagaaaaaaguagaaaaaaauaauugagaaaauuaaaucaaacaugaacuuacuuugauuuuugaacguugucuauacaagcuauaauuuuuagagcaaaccuucac
..........(((((((((((...((((((....(((.((.((.(((((......................((((((...(((((....)))))...))))))((((...))))....................(((((...(((..(((((....................)))))..)))....)))))((((((...........))))))))))).)).)).))).....))))))..))))))))))).........

Structure

cauaccaaga           AUC      -Cuca   a  g  a     uaaaaauaaauaaauaaaaacauuaaaaaacaacauuacgauguuuaauuuugagcaaaaguugcaccucccuuaaaaaaauuaa     -aaa   ug     aaauagaaa 
          UGCUCUAAAAG   GUAGUU     aga aa gu caaaa                                                                                     uuaau    uca  uauuu         a
          |||||||||||   ||||||     ||| || || |||||                                                                                     |||||    |||  |||||          
          acgagauuuuu   uaucga     ucu uu ca guuuu                                                                                     aauua    agu  auaaa         a
-cacuuccaa           -aa      acaua   g  g  a     --------------------------------------------------------------uaguuucauucaaguacaaacua     aaag   ua     aaaagauga 

Annotation confidence Not enough data

Genome context

Unknown

Mature pla-miR11601

• Accession: MIMAT0045454
• Description: Paeonia lactiflora pla-miR11601 mature miRNA
• Sequence: 11 - UGCUCUAAAAGAUCGUAGUUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26393656
   Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
   Zhao D, Gong S, Hao Z, Tao J
   Genes (Basel) (2015) 6:918-934