miRBase entry: pla-MIR11602

Stem-loop pla-MIR11602


Accession
MI0037334
Description
Paeonia lactiflora pla-MIR11602 precursor miRNA

Literature search
1 open access papers mention pla-MIR11602
(1 sentences)

Sequence

auaguucaguaucuaauggaucuuuccguucuaguuccaauacucuauccgagaguuaucaguauuuaucaaaucuguuccuaUCUAACGGAACGCUAUUGGAUCaaaugacaaa
.....(((..(((((((((....(((((((.(((.......(((((.....)))))...(((.((((...)))))))...)))...)))))))..)))))))))....)))....

Structure
auagu   --gu         aucu       --c   uuccaauacucuauccgagaguuau   u    a 
     uca    aucuaaugg    uuccguu   uag                         cag auuu  
     |||    |||||||||    |||||||   |||                         ||| |||| u
     agu    UAGGUUAUC    AAGGCAA   auc                         guc uaaa  
-aaac   aaaC         --GC       UCU   ----------------------cuu   -    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pla-miR11602

Accession MIMAT0045455
Description Paeonia lactiflora pla-miR11602 mature miRNA
Sequence 84 - UCUAACGGAACGCUAUUGGAUC - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26393656
    Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
    Zhao D, Gong S, Hao Z, Tao J
    Genes (Basel) (2015) 6:918-934