miRBase entry: pla-MIR11606

Stem-loop pla-MIR11606


Accession
MI0037338
Description
Paeonia lactiflora pla-MIR11606 precursor miRNA

Literature search
1 open access papers mention pla-MIR11606
(2 sentences)

Sequence

gcauaauuguuugcgaauuggaguccaccaugggaauacuuguaauucuucuuuuaagcugcccgugugcguaccuccucuucauuuucaucaagaaaguaUGGUGGACUCCAAUUCGCAUAcaaucaauga
.(((.(((((.(((((((((((((((((((((((....((((............))))...)))...................((((((.....)))))))))))))))))))))))))).)))))..))).

Structure
g   -a     u                    ------------------------------------   aaua    uaauu 
 cau  auugu ugcgaauuggaguccaccau                                    ggg    cuug     c
 |||  ||||| ||||||||||||||||||||                                    |||    ||||      
 gua  uaacA ACGCUUAACCUCAGGUGGUa                                    ccc    gaau     u
a   ac     U                    ugaaagaacuacuuuuacuucuccuccaugcgugug   -guc    uuucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pla-miR11606

Accession MIMAT0045459
Description Paeonia lactiflora pla-miR11606 mature miRNA
Sequence 102 - UGGUGGACUCCAAUUCGCAUA - 122
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26393656
    Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
    Zhao D, Gong S, Hao Z, Tao J
    Genes (Basel) (2015) 6:918-934