miRBase entry: pla-MIR11608

Stem-loop pla-MIR11608


Accession
MI0037340
Description
Paeonia lactiflora pla-MIR11608 precursor miRNA

Literature search
1 open access papers mention pla-MIR11608
(2 sentences)

Sequence

guacaucgccUCGCUUAGGGGUUGUUGAAGCGCuuuuagggucgcuuagcgcuuuuuugcgcuuaagcgucgcuuuucacaacacugagcaauaauagaugaca
((.((((.....((((((..(((((.((((.......((.(.((((((((((......)))).)))))).).))))))))))).)))))).......)))))).

Structure
-  a    --gccUC      GG     U    CGCuuuu  g u      -    uu 
 gu cauc       GCUUAG  GUUGU GAAG       ag g cgcuua gcgc  u
 || ||||       ||||||  ||||| ||||       || | |||||| ||||   
 ca guag       cgaguc  caaca cuuu       uc c gcgaau cgcg  u
a  -    auaauaa      -a     -    -------  g u      u    uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pla-miR11608

Accession MIMAT0045461
Description Paeonia lactiflora pla-miR11608 mature miRNA
Sequence 11 - UCGCUUAGGGGUUGUUGAAGCGC - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26393656
    Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
    Zhao D, Gong S, Hao Z, Tao J
    Genes (Basel) (2015) 6:918-934