miRBase entry: tca-mir-3851m-1

Stem-loop tca-mir-3851m-1


Accession
MI0037345
Description
Tribolium castaneum tca-mir-3851m-1 precursor miRNA


Sequence

uuuuuugaguaaauuuaguacugGGUUGGCACAGAGUAGUACUAUGuaaaauucuauucuaUAGUACGACCCAUGUCGGCCCAguaagagauuucaauucaccagc
.....(((((((((((..(((((((((((((..(.((.((((((((.............)))))))).)))..)))))))))))))..))))))..))))).....

Structure
uuuuu     --      ag             CA A  A        uaaaa 
     ugagu  aaauuu  uacugGGUUGGCA  G GU GUACUAUG     u
     |||||  ||||||  |||||||||||||  | || ||||||||     u
     acuua  uuuaga  augACCCGGCUGU  C CA CAUGAUau     c
cgacc     ac      ga             AC -  G        cuuau 


Annotation confidence Not enough data
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Genome context
ChLG10: 7128891-7128996 [+]

Database links

Mature tca-miR-3851m-5p

Accession MIMAT0045466
Description Tribolium castaneum tca-miR-3851m-5p mature miRNA
Sequence 24 - GGUUGGCACAGAGUAGUACUAUG - 46
Evidence experimental
Illumina [1]

Mature tca-miR-3851m-3p

Accession MIMAT0045467
Description Tribolium castaneum tca-miR-3851m-3p mature miRNA
Sequence 62 - UAGUACGACCCAUGUCGGCCCA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96