Stem-loop tca-mir-11618a-2

Accession

MI0037412

Description

Tribolium castaneum tca-mir-11618a-2 precursor miRNA

Sequence

acaaaauguuuucgauguauAGUUAGCAUUGGUCGUUUCUAUGcuuuuuaugaucaUAUACCGAUCGAUGCUCGCUUUauuucgaaucacauaacug
.....((((.(((((.(((.(((.(((((((((((....((((.((.....)).))))...))))))))))).))).))).)))))..)))).....

Structure

acaaa    -u     u   u   U           UUUC    c  u 
     augu  uucga gua AGU AGCAUUGGUCG    UAUG uu u
     ||||  ||||| ||| ||| |||||||||||    |||| || u
     uaca  aagcu uaU UCG UCGUAGCUAGC    AUac ag a
gucaa    cu     u   U   C           -CAU    u  u 

Annotation confidence Not enough data

Genome context

Unmapped66: 4367-4463 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tca-mir-11618a-2

Mature tca-miR-11618a-5p

• Accession: MIMAT0045489
• Description: Tribolium castaneum tca-miR-11618a-5p mature miRNA
• Sequence: 21 - AGUUAGCAUUGGUCGUUUCUAUG - 43
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11618a-3p

• Accession: MIMAT0045490
• Description: Tribolium castaneum tca-miR-11618a-3p mature miRNA
• Sequence: 57 - UAUACCGAUCGAUGCUCGCUUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96